Detailed information on CNT30675764


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691552Setaria viridisOryza sativa45.4213.0392.98114forward
CNT30139541Setaria viridisLolium perenne37.459.3292.5594forward

Expression of CNT30675764

Peptides detected in this lncRNA

>peptide 1 (57 aa)
VAYGSPQIQLLPSSYTKNNATQAHYMGRPIIQPKVTQCNERSKNDGTRAWGRRACPG*

>peptide 2 (82 aa)
RSIWFTPNTTAAEQLHKEQRHTGTLYGSTNNTTKGHPMQRTIEERRHSSMGSTSLPWLIPTNTLLHSSPGDLSFSPVRNTHPS

Sequence

>CNT30675764
ACGTAGCATATGGTTCACCCCAAATACAACTGCTGCCGAGCAGCTACACAAAGAACAACGCCACACAGGCACACTATATGGGTCGACCAATAATACAACC
AAAGGTCACCCAATGCAACGAACGATCGAAGAACGACGGCACTCGAGCATGGGGTCGACGAGCTTGCCCTGGCTGATCCCGACGAACACCTTGTTGCACT
CTTCGCCGGGGGACTTGAGCTTCTCGCCGGTCAGGAACACGCACCCGAGCT