Detailed information on CNT30674392


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT004661, E-value = 2e-60

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30336936Setaria viridisCynara cardunculus22.556.391.9462reverse complement

Expression of CNT30674392

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MGDKLHRREGNIPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSV*

>peptide 2 (33 aa)
KHCFGAGCASGTKSRQTLNTRYDLKITGVKVGQ*

Sequence

>CNT30674392
CAAAGCACTGTTTCGGTGCGGGCTGCGCGAGCGGTACCAAATCAAGGCAAACTCTAAATACTAGATATGACCTAAAAATAACAGGGGTCAAGGTCGGCCA
GTGAGACGATGGGGGATAAACTTCATCGTCGAGAGGGAAACATCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTGGGGGT
GCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCATCCTTTAAAGAGTGTGTAATAGCTCACTTATCGATACCA