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Detailed information on CNT30673979


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30583583Setaria viridisEchinochloa crusgalli42.5925.0686.76204forward

Expression of CNT30673979

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MTHVAAVTKSSSRLVAHHRPAAAAATDGLIIDRVGGYDWN*

Sequence

>CNT30673979
CAAAACAATAATTAATTGACGAACTTTACTTGCCAGTAAGAGAAAATAAACAAGCCACAGATTTGTGCCACCGAACCCGATCAACATTAGCAGTACCATC
AGGTCGCCGGCATCACAGCCAATCAACACATACTTAAACGTGCCGAGTTGCCGGCGACGAGATTTAAACAAACAGCAGCGAAGCCATAGCCACGGATATA
GTTAATTAACACGTCTTTCACATGACACATGTAGCAGCAGTAACGAAAAGCAGCAGCAGACTAGTAGCACACCACAGGCCAGCAGCGGCAGCCGCCACCG
ATGGATTAATTATAGATCGGGTTGGTGGATATGATTGGAATTGAAGGGAATTACCCCAAGCTAGCAAGCAAGCACGCTACTTCTTGAGGCTGCCGCGGAT
GCCGGGCTTGGGCTTGGAGTTGGAGGAGGCTGCGGCGGCAGGCGAAGCGAGGATGCAGGGGCTGCACCTCCACGCCTAT