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Detailed information on CNT30672573


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067135Setaria viridisLeersia perrieri20.0518.9591.9587forward

Expression of CNT30672573

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MMTHCKLRLKIVHMTTAMAIDKTSAILKHLGITKAEAESTTRHIISSWLQPW*

>peptide 2 (44 aa)
MTPTATVCLMSRTAKRPRGGEGEGARGGGGAGDGKEGRLPGGESD

Sequence

>CNT30672573
ACTTGCATTTAACAAGCACCGACAAGGGCACAAATCAGTCTCAGGTAATTTAAGTTTTGCAGAATCCAAAATATTAAAACTGTGTTGAACTGACAAACAG
AATGATGACACATTGCAAGCTGAGACTAAAAATAGTTCACATGACAACAGCAATGGCCATAGACAAAACTTCAGCGATATTGAAGCATCTAGGTATAACA
AAAGCAGAAGCGGAATCAACCACCAGACACATCATTTCTTCTTGGCTGCAGCCTTGGTAACCTTGGCGCCGGTAGGGTCCTTCTTCTCCACACTCTTGAT
GACTCCAACAGCTACCGTCTGCCTCATGTCACGGACAGCAAAGCGACCCAGAGGAGGCGAAGGAGAGGGGGCGCGGGGCGGAGGCGGCGCGGGTGACGGC
AAGGAGGGGAGGCTACCTGGTGGCGAGAGCGATG