Detailed information on CNT30671204


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30593752Setaria viridisEragrostis curvula31.869.6289.57115forward

Expression of CNT30671204

Peptides detected in this lncRNA

>peptide 1 (37 aa)
SRQKKIRRKQTRCMQHALTNKHCPYSCVRVACEYVTA*

>peptide 2 (35 aa)
QADKRKFGENKRDACSMHSRTNTARIHACVLHAST*

>peptide 3 (43 aa)
KQTKENSAKTNAMHAACTHEQTLPVFMRACCMRVRNRVAIKRI*

>peptide 4 (43 aa)
MRLSLTGMSRLMPSTLALMAVQRQAAASRATRRKALDAMATVL*

Sequence

>CNT30671204
CAAGCAGACAAAAGAAAATTCGGCGAAAACAAACGCGATGCATGCAGCATGCACTCACGAACAAACACTGCCCGTATTCATGCGTGCGTGTTGCATGCGA
GTACGTAACCGCGTAGCTATCAAGCGCATATGAAACCACTGGGGAGGTTCTTGCCACAGTAGTTGACAATGAGGCTGAGCTTGACAGGGATGTCGAGGCT
GATGCCGAGCACGTTGGCCTTGATGGCGGTGCAGAGGCAGGCGGCGGCCTCGAGGGCGACGAGGAGGAAGGCCTTGGATGCCATGGCGACAGTACTGTAA
AACCCAGAGAGTGCTCTTACACACGGGGGGTAGGAGAATGCTGGTGCAACTGGATGGGAAT