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Detailed information on CNT30593752


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 1e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692505Eragrostis curvulaOryza sativa8.6226.6890.29103forward
CNT30671204Eragrostis curvulaSetaria viridis9.6231.8689.57115forward
CNT30522474Eragrostis curvulaSetaria italica10.3825.7383.06124forward
CNT30629390Eragrostis curvulaVigna unguiculata9.4622.6584.07113forward
CNT30187034Eragrostis curvulaSecale cereale8.6221.7388.35103forward
CNT30226858Eragrostis curvulaHordeum vulgare11.3848.483.82136forward
CNT30589645Eragrostis curvulaMusa acuminata9.7921.5985.47117forward
CNT30664801Eragrostis curvulaTriticum dicoccoides6.8626.291.4682forward
CNT3016391Eragrostis curvulaZea mays7.5324.5285.5690forward
CNT3067194Eragrostis curvulaLeersia perrieri11.323.484.44135forward
CNT30685047Eragrostis curvulaTriticum urartu11.325.5285.19135reverse complement
CNT30348037Eragrostis curvulaEragrostis tef11.5527.6686.96138forward
CNT30365845Eragrostis curvulaSorghum bicolor11.328.7285.93135forward
CNT30583731Eragrostis curvulaEchinochloa crusgalli11.3821.5286.03136forward

Expression of CNT30593752

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MPFSLCVLIKEDWLAVGGGELARERERPGLLACLLRAELARPASL*

>peptide 2 (41 aa)
MGHVLHVCVFDYIRSGHLALHDMTASNEVNWSVFYSEDNLN*

>peptide 3 (34 aa)
MYNEETCVCMLKDACVSLVINQAQMKPSGTDLPQ*

>peptide 4 (63 aa)
MSRLMPRTLALRAVQRQTAASRSARPSRSGQHESVGTLPRETFTSPSTLAHTPSFSVSLGHLP*

>peptide 5 (47 aa)
MYYTSELKTYSTRQRNHSDWRSCSTDCWNKEKKKDGRGINLYYGGNI*

Sequence

>CNT30593752
GCTATATATTGAATCGTGCCATTCGTGACCCTAATATCTGATGTTATGGGGCATGTGCTGCATGTGTGTGTATTTGACTATATCCGCTCTGGGCATTTAG
CTTTGCACGATATGACTGCTTCAAATGAAGTCAATTGGTCAGTATTCTATAGCGAAGATAACCTGAATTAATGTACAGATAGCAGTAGGTGATGAGAATT
TCATATATAGCAACAAAGCTTCACTTGAATAAATATTATATACGAAGAATTCATACACTCATTGATTGATAAATTGTACAAGCTGTTTCCTTTTACCAAA
ACAAGTAGAAATTACATGCATGCCTATTGTTGAAGCAACACGTATCTTTCTTATAGAGCCAGCAGACACGCAAATTAATTAGAAACAGAAAACCAATGTA
TTACACATCCGAATTGAAGACGTACAGTACAAGACAGAGGAATCACAGTGATTGGAGAAGTTGTTCAACTGACTGTTGGAACAAGGAAAAAAAAAAGGAC
GGCCGGGGGATCAATTTATATTATGGGGGAAATATATAGTGTGCATGTATAATGAAGAGACGTGCGTGTGCATGCTGAAGGATGCCTGCGTGTCCCTTGT
AATTAATCAAGCGCAGATGAAGCCCTCGGGGACGGACTTGCCGCAGTAGTTGAGGAGGAGGCTGAGCTTGACGGGGATGTCGAGGTTGATGCCGAGGACG
TTGGCCTTGAGGGCGGTGCAGAGGCAGACGGCGGCCTCAAGGTCGGCGAGGCCATCCAGAAGCGGGCAGCACGAGTCAGTGGGCACCTTGCCCAGGGAAA
CCTTCACCAGCCCAAGCACGTTGGCGCACACGCCCAGCTTCAGCGTGTCCTTGGGGCACTTGCCGTAGCTCGACGGCGGCGGCGGGCACGGCTTCGGCGA
CGGCGGCGGAGGGCTCGGGTGAGAGCAGCCACCGCACGCCGCCACCTCGCCAACCAAAAAGGCGCTTGTTGCCACCAGCACCACCAGGATCATCACAGCA
AACCTCTTCTGCTGCTGCTGCTGCGACGCCATGCCTTTCTCTCTCTGTGTACTAATTAAGGAGGACTGGCTAGCTGTAGGTGGTGGTGAGCTAGCTAGAG
AGAGAGAGAGGCCAGGCTTGCTTGCTTGCTTGCTTAGGGCTGAGCTAGCCAGGCCTGCCTCTTTATAGGCCTTTGGTGCCTAGTGTGCCGTTGGG