Detailed information on CNT30670610


BLAST search results

BLAST vs Swiss-Prot:
sp|P12857|ADT2_MAIZE, E-value = 2e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020919Setaria viridisCitrullus lanatus40.8913.781.82110forward

Expression of CNT30670610

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MALGHVVPCGKSPLIRRDRRADVTGPYTF*

>peptide 2 (60 aa)
MVRLKQSPIPLYGSGSCSSLWEISSHKTRQKGRCYGPVHLLRSWSSGGTGHRAYEGQLVG*

>peptide 3 (39 aa)
SREVADNVSSVTPPQGGETLILDGTFEAVTNTLVWLWVM*

Sequence

>CNT30670610
TGAGTAGGGAAGTAGCGGATAACGTTAGCAGTGTTACCCCTCCACAAGGAGGAGAAACCCTCATCCTTGATGGTACGTTTGAAGCAGTCACCAATACCCT
TGTATGGCTCTGGGTCATGTAGTTCCTTGTGGGAAATCTCCTCTCATAAGACGAGACAGAAGGGCAGATGTTACGGGCCCGTACACCTTCTGAGAAGCTG
GAGCTCAGGTGGAACTGGCCACCGAGCTTATGAAGGACAGTTGGTTGGTTGACCTGGTCCGCCATCACC