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Detailed information on CNT30669047


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 8e-134

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30442540Triticum dicoccoidesAegilops tauschii97.99100.4395.9927forward
CNT30240158Triticum dicoccoidesAvena sativa60.2555.4590.7570forward

Expression of CNT30669047

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MCLLAGHKVGGEGPRVVVDGVGEVVSEVLKRTLTGDDGLHKVSKHGEHCKAAVLDLLHLELGKRLWIVS*

>peptide 2 (43 aa)
MACTKYPNMENIARRPFLISFTLSSANASGSSARPRGSKLPPG*

>peptide 3 (39 aa)
MVTRPPPSAYEAPASLIAGEESAIVVEAAIAAGWNRASC*

>peptide 4 (29 aa)
MAQRQWITSSSRFLAKVSGSAERPAVSHP*

Sequence

>CNT30669047
TTAGCAAACCCAAACAATTAATGTCCACTCGTATTCATATGGAAAATGAAAACCATGCATTTCTCATATAGACATTTCATGTTCCAGATGGGCGCTATTT
GTAAACATCTTTGATAGTGTACAACATCAACGATCAGATATTAATCATACATCCAGAGCACACATATACTCCTGAGAAGTCGATTTTCATGTGTTTACTT
GCCGGGCACAAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCTCAAGCGGACCCTTACCGGTGACGATG
GCCTGCACAAAGTATCCAAACATGGAGAACATTGCAAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCAAACGCCTCTGGATCGTCAGCTAGGC
CAAGGGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACGATCTCTCCGAGCGGGCCACCAGCAACGCGGTAGTCGAGGCCGCCCTCGCTGAAGATCTG
GGAGCCGGCCTTGAACCAGACGGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGG
CAGTGGATCACCTCGAGCTCGCGGTTCTTGGCGAAGGTCTCCGGGTCGGCGGAGAGGCCCGCGGTGTCCCACCCGTAGTCGCCCGGGAACTCGCCGCTGA
GGTAGCTCGGGGGCTCGCCAGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGGGCCGTACCAGGGGCTGTTGGAGGCGGCGGCCTTGGGCGCGGCCTTGCG
CATGGTGACGCGGCCGCCGCCGAGCGCGTACGAGGCTCCGGCGAGCTTGATCGCGGGGGAGGAGAGCGCCATTGTGGTGGAGGCCGCCATTGCTGCCGGA
TGGAACAGAGCAAGCTGCTGATGTGCGGCTGCCGCTGCTACTGATG