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Detailed information on CNT30668801


BLAST search results

BLAST vs Swiss-Prot:
sp|P04782|CB24_PETSP, E-value = 1e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30398595Triticum dicoccoidesTriticum turgidum98.3893.3699.82548forward

Expression of CNT30668801

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MCLLAGHKVGGEGPRVVVDGVGEVVSEVLKRTLTGDDGLHKVSKHGEHCKAAVLDLLHLELGKRLWIVS*

>peptide 2 (43 aa)
MACTKYPNMENIARRPFLISFTLSSANASGSSARPRGSKLPPG*

>peptide 3 (30 aa)
SRWALFVNIFDSVQHQRSDINHTSRAHIYS*

Sequence

>CNT30668801
GTTCCAGATGGGCGCTATTTGTAAACATCTTTGATAGTGTACAACATCAACGATCAGATATTAATCATACATCCAGAGCACACATATACTCCTGAGAAGT
CGATTTTCATGTGTTTACTTGCCGGGCACAAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCTCAAGCG
GACCCTTACCGGTGACGATGGCCTGCACAAAGTATCCAAACATGGAGAACATTGCAAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCAAACGC
CTCTGGATCGTCAGCTAGGCCAAGGGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACGATCTCTCCGAGCGGGCCACCAGCAACGCGGTACCCCTCG
ACAGCGCCCATGAGCACGACCTGGCAAGCCCAGATGGCAAGGATGCTCTGAGCGTGGACCAAGCTAGGGTTACCGAGGTAGTCGAGGCCGCCATTGCTGC
CGGATGGAACAGAGCAAGCTGCTGATGTGCGGCTGCCGCTGCTACTGATGGCTGCGT