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Detailed information on CNT30398595


BLAST search results

BLAST vs Swiss-Prot:
sp|P04782|CB24_PETSP, E-value = 2e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30443381Triticum turgidumAegilops tauschii90.4654.8696.61531forward
CNT30668801Triticum turgidumTriticum dicoccoides93.3698.3899.82548forward

Expression of CNT30398595

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MCLLAGHKVGGEGPRVVVDGVGEVVSEVLKRTLTGDDGLHKVSKHGEHCKAAVLDLLHLELGKRLWIVS*

>peptide 2 (43 aa)
MACTKYPNMENIARRPFLISFTLSSANASGSSARPRGSKLPPG*

Sequence

>CNT30398595
GAAAATGAAAACCATGCATTTCTCATATAGACATTTCATGTTCCAGATGGGCGCTATTTGTAAACATCTTTGATAGTGTACAACATCAACGATCAGATAT
TAATCATACATCCAGAGCACACATATACTCCTGAGAAGTCGATTCTCATGTGTTTACTTGCCGGGCACAAAGTTGGTGGCGAAGGCCCACGCGTTGTTGT
TGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCTCAAGCGGACCCTTACCGGTGACGATGGCCTGCACAAAGTATCCAAACATGGAGAACATTGCAAGGCG
GCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCAAACGCCTCTGGATCGTCAGCTAGGCCAAGGGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACG
ATCTCTCCGAGCGGGCCACCAGCAACGCGGTACCCCTCGACAGCGCCCATGAGCACGACCTGGCAAGCCCAGATGGCAAGGATGCTCTGAGCGTGGACCA
AGCTAGGGTTACCGAGGTAGTCGAGGCCGCCATTGCTGCCGGATGGAACAGAGCAAGCTGCTGATGTGCGGCTGCCGCTGCTACTGA