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Detailed information on CNT30667496


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 6e-49

BLAST vs NONCODE:
NONSTUT000620, E-value = 4e-16

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30302673Triticum dicoccoidesTriticum aestivum74.8910097.73352forward
CNT30649899Triticum dicoccoidesRosa chinensis48.5132.6292.54228forward

Expression of CNT30667496

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICI

>peptide 2 (69 aa)
AQADLSEVHLFITQRYCCASNSFNQQITRGLDSSLNQHSRTDTNEKTVQMNDRTPGQLRTTTPRRRSTM*

Sequence

>CNT30667496
GCGCAAGCAGATTTATCTGAAGTTCACTTATTCATTACGCAACGATACTGCTGTGCCAGCAACAGTTTCAACCAACAGATAACACGGGGACTCGATAGTT
CATTAAACCAACACAGCAGGACTGACACGAACGAGAAAACAGTTCAAATGAACGACAGGACGCCAGGGCAATTACGGACCACCACACCACGGAGACGGAG
CACCATGTGAAGGGTGGATCAAACGCCAGGGCAATTACTGACCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGC
GAGGGTACGGCCATCCTCTAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG
ATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATCT