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Detailed information on CNT30665006


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 5e-105

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30299798Triticum dicoccoidesTriticum aestivum101.6186.694.84756forward
CNT30393931Triticum dicoccoidesTriticum turgidum99.8785.599.06743forward
CNT30251678Triticum dicoccoidesAvena sativa74.7376.3792.27556forward
CNT30685447Triticum dicoccoidesTriticum urartu101.3487.4797.88754forward

Expression of CNT30665006

Peptides detected in this lncRNA

>peptide 1 (51 aa)
DYSISEREEAEIDDDTHAAASISHEVVGLELELTALTCRGRSWWRRPRRCC*

>peptide 2 (29 aa)
MAQRQWMTSSSRFLAKVSGSADSPAVSQP*

>peptide 3 (58 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFASGELRLAVGGAGGRWCC

Sequence

>CNT30665006
GACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGA
CGGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAG
AGCGGGTCCACGATCTCGCCCAGCGGGCCGCCGGCGACGCGGTAGCCCTCCACGGCGCCCATGAGCACCACCTGGCAGGCCCAGATGGCGAGGATGCTCT
GCGCGTGCACCAGGCTGGGGTTGCCGAGGTAGTCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATGACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTC
GGGGTCGGCGGACAGCCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGCTCGGGGGGTCGCCGGAGAGCGGGCCGAGGTAGAGC
ACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCC
TGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTGCTAGCTGGCTTTGCTTCGGGTGA
GCTGAGGCTGGCAGTGGGAGGCGCTGGTGGTCGTTGGTGCTGTG