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Detailed information on CNT30664294


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 2e-99

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186677Triticum dicoccoidesSecale cereale86.3673.3396.81627forward

Expression of CNT30664294

Peptides detected in this lncRNA

>peptide 1 (51 aa)
DYSISEREEAEIDDDTHAAASISHEVVGLELELTALTCRGRSWWRRPRRCC*

>peptide 2 (58 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFASGELRLAVGGAGGRWCC

>peptide 3 (52 aa)
MSTTWQAQMARMLCACTRLGLPSMAQRQWMTSSSRFLAKVSGSADSPAVSQP*

Sequence

>CNT30664294
GACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGA
CGGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAG
AGCGGGTCCACGATCTCGCCCAGCGGGCCGCCGGCGACGCGGTAGCCCTCCACGGCGCCCATGAGCACCACCTGGCAGGCCCAGATGGCGAGGATGCTCT
GCGCGTGCACCAGGCTGGGGTTGCCGAGCATGGCCCAGCGGCAGTGGATGACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGACAGCCC
CGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGCTCGGGGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTAC
CACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGG
TGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTGCTAGCTGGCTTTGCTTCGGGTGAGCTGAGGCTGGCAGTGGG
AGGCGCTGGTGGTCGTTGGTGCTGTG