Detailed information on CNT30652731


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LT78|RD21C_ARATH, E-value = 3e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513754Rosa chinensisJuglans regia22.5129.0487.74106forward

Expression of CNT30652731

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MNSLQSSNLHRFQNHILLLERHDQCHLDRRSNHRHKF

>peptide 2 (63 aa)
LKTQAFLDITNGIVTWTAVFSSSAANRILIFTATINQAVVKEFIEATTCLISWTIGEVSALAW*

>peptide 3 (39 aa)
MSHQLDNRRSLRIGLVKERVEVVVEELEMDKERVQLTLW*

Sequence

>CNT30652731
CTTAAGACACAGGCCTTCCTCGATATCACAAATGGGATAGTCACTTGGACAGCAGTATTCAGTTCCAGTGCAGCAAACCGCATTCTCATATTCACAGCAA
CCATAAATCAAGCAGTAGTCAAAGAATTCATAGAGGCAACAACATGTCTCATCAGCTGGACAATAGGAGAAGTCTCCGCATTGGCTTGGTGAAGGAGAGG
GTGGAGGTGGTGGTGGAGGAGTTGGAGATGGATAAGGAGAGGGTGCAACTGACTCTTTGGTAGGATATGAAGCCATGGCATTGACTGCACAAACCCCATA
TGGCAAATCGGTGTTCCTTCTGAGGTAAAAGTATCCTTCAATCCCCCAACTAGTTCCCCATGAATTCTTTACAATCCAGTAATCTTCACCGTTTTCAGAA
CCATATCCTACTATTAGAACGGCATGATCAATGTCATTTGGATCGTCGGAGCAATCACCGTCATAAATTCC