Detailed information on CNT30649322


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10HD0|CB23_ORYSJ, E-value = 5e-87

BLAST vs NONCODE:
NONSTUT002515, E-value = 1e-77

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526271Rosa chinensisPhaseolus vulgaris43.9929.1384.02194forward

Expression of CNT30649322

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MHQALPIGCGSPQAHGFWQRSRGLRIVQQCPIHSHL

>peptide 2 (31 aa)
ASRPFLSSFTFSSAKASGSSASPSGSNDPPG*

Sequence

>CNT30649322
TTGCCAGCCGCCCATTTTTGAGTTCCTTCACCTTCAGTTCAGCAAAGGCTTCAGGATCATCAGCAAGTCCAAGTGGGTCAAATGATCCTCCAGGGTAAAG
TGGATCCAGACCTTCGCCAAGTGGTCCTCCACCGACTCTGTATCCCTCAACAAATCCCATGAGGACAACTTGGACAGCCCAGATTGCTAAAATGCTCTGG
GCATGGACAAGGTTTGGGTTGCCAAGATAGTCAAGGCCGCCCTCTGAAAAGATTTGGGACCCGGCCTTGAACCAAACAGCCTCACCGAACTTGACACCAT
TCTTGGACAAGACTTCTGGGAAGACGCAGCCCAATGCACCAAGCATTGCCCATCGGCTGTGGATCACCTCAAGCTCACGGTTTTTGGCAAAGGTCTCGGG
GTCTGCGGATAGTCCAGCAGTGTCCCATCCATAGTCACCTG