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Detailed information on CNT30641889


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640872Cannabis sativaNymphaea colorata53.0839.8983.77302forward
CNT30154791Cannabis sativaPrunus persica80.4958.9484.28458forward

Expression of CNT30641889

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MMDCILLIEDCNLEMLDYNLVRLDCNLEMLDCNWVKLDCNLEK*

>peptide 2 (44 aa)
MWGCTQVRWDYIQVKLGYNQGKLDYIQGKMGYSLEMMGCNQGMK*

Sequence

>CNT30641889
CTGTAATTTGGAGATGTAGGACTATAAGGACTGGCTGGTGGCAACCTCGGACTGCTTGGAGAATAAGCCAATGATGGACTGTATTTTGCTGATTGAGGAT
TGTAACTTGGAGATGTTGGACTATAACTTGGTGAGGTTGGACTGTAACTTGGAGATGTTGGACTGTAACTGGGTGAAGTTGGACTGTAACTTGGAGAAGT
AGGGCTATAGCTTGGTGATGTGGGTGAATAAGATGGACTTGTAGGAGAATAGGCAGGACTTGTTGGACTATAGCCCGGGGAGCTAGGACTGTAGGTTGGA
GATGTGGGGCTGTACCCAGGTGAGGTGGGACTATATCCAGGTGAAGTTGGGCTATAACCAGGGGAAGTTGGACTATATCCAGGGGAAGATGGGCTATAGC
CTGGAGATGATGGGCTGTAACCAGGGGATGAAGTAGGTGAAAACGCCATTGTTCCAGCATATGGCGAGAATTGCGCATCAGTAATGGGAGACAGACGGAG
ATTTGGGCTCAGCAGATAGTTTGGTGACATCAAACCATCATGGTAAGGAGTGGCCGACATTGGAGAACG