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Detailed information on CNT30641867


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 8e-104

BLAST vs NONCODE:
NONTPRT002153, E-value = 3e-76

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3059840Cannabis sativaArabidopsis lyrata74.9239.8883.81457forward

Expression of CNT30641867

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSKVMVFPVKVFTKICMPPLRRSTK*

Sequence

>CNT30641867
CACAAGGCCAAACCATAAACTCTCATATATAACAAGTTTTAAAAACCATAAACCATACTAAATCATAAAAGCAGTTTGTTTCATAGTAATAAAAACCATA
AACATAACAATAAAATGCATTCCATTCATAACAGCTATAAACAGATTTAAAAGCCACCACGAAGACGGAGAACAAGGTGAAGAGTAGACTCCTTCTGAAT
GTTGTAATCAGCCAAAGTCCTACCATCTTCCAACTGTTTACCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCCTGAATTTTCGCC
TTTACATTGTCTATGGTATCCGAACTTTCCACCTCCAAAGTTATGGTCTTTCCGGTCAAGGTCTTCACAAAGATCTGCATGCCACCCCTCAGACGCAGCA
CCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATCAGCTAAAGTCCTGCCATCTTCCAATTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGTGG
GATTCCTTCCTTGTCTTGAATTTTCGCCTTTACATTGTCAATTGTATCCGAGCTTTCTACCTCAAGGGTAATGGTCTTTCCTGTAAGGGTTTTCACAAAG
ATTTGCATCT