Detailed information on CNT30632183


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30606651Vigna unguiculataGossypium raimondii9.2842.884.36211forward

Expression of CNT30632183

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LRLLFSSFPLHSHNFYSISGAQACKHIFQ*

>peptide 2 (30 aa)
CAFFFLPFLYTLTISILSPVLKPANIFFSK*

>peptide 3 (30 aa)
MYLFQSYYYYLVNLSYILFTLSLLSKFMLT*

>peptide 4 (52 aa)
MTFMYSFIQIMQYNPLKKLFVNSKIVSISIRTKSQNPRSTVFIHFIYHYTIY*

>peptide 5 (30 aa)
MTLHIVETLIRLMKFYIMCNVFPVKDEMHI*

>peptide 6 (49 aa)
MEFYVTQSKHLEFSIVIHSFFEENTSCRYKFCSSSIVGLVHSFQLTMNE*

>peptide 7 (42 aa)
MYCLKQEKCFRDILFKNYIYLLLFHLLNHAILQKEAPLLRRW*

>peptide 8 (34 aa)
MHNARTDVWSPFVFVTFTHLLGFQAAKSEYLLSK*

>peptide 9 (33 aa)
APSFFFLSFTLSQFLFYLRCSSLQTYFSVSKPF*

>peptide 10 (29 aa)
MPELMYGLLSFSLLSLICWAFKLQKVNIF*

Sequence

>CNT30632183
CTGCGCCTTCTTTTTTCTTCCTTTCCTTTACACTCTCACAATTTCTATTCTATCTCCGGTGCTCAAGCCTGCAAACATATTTTTCAGTAAGTAAACCTTT
TTGACTGTATATTATGGAAATTTCAAATTATTTTGTTCTTTTCATCATTTATCTCTGAGCACTATGTTCATTCTTAACTATTTCCTTCAAGGTATATAGA
CTTAATACATTTACAAAACACTTTACTTATTTGTTTAATAAAAGAAAGTAAAATAAATAATATCTATCTCAGAAATTTATTACTTATACATTATTAGACA
TGTTATGTATTGTCTCAAACAAGAAAAATGTTTTAGAGACATCTTATTCAAAAATTATATTTATTTACTGTTATTCCATCTTCTAAACCATGCTATTTTG
CAGAAAGAAGCACCATTGTTGAGGAGATGGTGATATTAGATATTATTAGAATTTTATTTATCAAAATTATTTTTTAATTTTGAATCGAACATAAAGAAAA
TTTATTTTGATTAAGATCCCTATCAAGTTTCACTAATGCATGTATTCATTCATAAATAAATAAAACAGATTTTAAAGATTAATCTTATATCAAAAATCAA
TATTATGCTACTAATCAAGTGAATATTTGATCTTTCACAGTAATGACATTACATATTGTAGAAACTCTCATCAGGTTAATGAAATTTTATATAATGTGTA
ATGTTTTTCCTGTGAAAGATGAAATGCATATTTGATTAACAGCATAATCTAATATGATATAAGATATTTCCATGCATTTCTTGTGCCACAATAAAATTTG
ACTTTTACTTTAAGTCTGGAAAGCAGAGTGATGAATACAATTTAGCCATAAAAATTATATCTTCTTGAGAGTAAGTCTTTTACAATTATGTATTTGTTTC
AATCTTATTATTATTATTTAGTAAATCTCTCATACATATTGTTTACACTATCTCTGTTGTCCAAATTTATGCTAACTTAAAATACATGTAATACAATTTA
TTAAAAAGAAAATTAGTTATCCTTGAAAAAGAAACAAAGAAAATTAGTTATCTTTTTGTTCATATGGCAAAGATGCAGAGGTAAGATTCAAATGCATAAT
GCCAGAACTGATGTATGGTCTCCTTTCGTTTTCGTTACTTTCACTCATTTGTTGGGCTTTCAAGCTGCAAAAAGTGAATATCTTCTGAGTAAGTAATTTT
TTTTTTCTTTCATTCTCTTCCCATATACCATGTTAAACTGACTATTCTTTCTTTTCTTATTTTTCTTTTTAAGTAGTTTAATGGAATTATTTTTCGGTGA
ATGGGAAATCAAAATAGCAGGAAGGAAGAAAACCTAATCTGACAGTCTCCAAAACACAGACGTTTGAATTCAAAGTGGCCATTGAATTTTCTGACAACAT
AAGTCAGATACAAAATTGTGAACAGAGGCTTTCTCTGTCTGAGAAGAGTGTTGGTTCCTTGATGCACACTATAAATACATGGAATTTTACGTAACACAAT
CAAAACACTTAGAATTTTCCATCGTTATTCATAGTTTCTTTGAAGAAAACACATCTTGCAGATACAAATTTTGTTCAAGTTCAATCGTGGGTTTGGTTCA
CTCCTTCCAATTGACAATGAATGAATGAATGATGTAGAATTTTGAGGCTTCTGAGGTCAAGACATTTATCTATGAATATTACGCGACAACAAGTGATGCA
TGATTTAGACACATAGGAAAAACAAGTTATATCAGTTGTTTTTCGCTTCATTTCAAAGATGTAATGAGACAATAAGTTATATCAGTTGAGAGCATATGGA
AAAGCAACTATAACATGTTAAATATAGAGTGACTATGACTTTTATGTATTCTTTTATTCAAATCATGCAGTACAACCCTTTAAAGAAATTATTTGTAAAT
TCAAAAATAGTGTCTATATCGATCAGAACCAAATCACAAAATCCACGCTCAACTGTGTTTATCCATTTCATTTACCATTATACCATATATTAAAAACATA
GCCTATGTTAAAAAAAAGAAACATCAGAGACGATAACAAAACTTTAAACGAAAAATTTGTTCTTTTTTCAACAATTTCTGATCTCTAGTAGACTTATCAG
TAGAATTCAAACCTAGATGAAGTTCTGACCATCTGTTGGAGAAAAAAGAACGAGTGGCTCTTGCAGGATTCCCATGAAATTCTTCGATTTCTTCCGGAAG
CAAATTATTATTCATCTGCTTCTCACGTTCCATGAATAGTCGGCACATCGAGGAATATCCAGAAAGGATTTTAA