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Detailed information on CNT30629314


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SIT9|NFYB7_ARATH, E-value = 3e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30717318Vigna unguiculataMalus domestica golden7.326.1789.2956forward
CNT30327130Vigna unguiculataAsparagus officinalis14.624.7289.29112forward

Expression of CNT30629314

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MAQRRSSPLMVFLFSLWHLSEASPVMKLMNS

>peptide 2 (37 aa)
VSNNSYFALSELSISFSPQFDLIKRVKWRYIAAKNLN*

>peptide 3 (37 aa)
MSRRVFLILFGHGTLFSLSFPVVVEVELQGSNIVLKP*

Sequence

>CNT30629314
GTAAGCAACAACTCTTATTTTGCACTTTCTGAATTGTCCATTTCATTTTCCCCTCAGTTTGATCTCATCAAAAGAGTTAAATGGAGATATATAGCTGCGA
AAAACTTGAATTAACCTGAGATATTCATTGATGGAAACGTGACTCTGGTTCATCAGTACTTCATAAAGTTGCAGTACTTTTGAAATGACGAAAAGGGTAC
AAAATTAAGATTAAGTCCCCTCTTCAACAGCACGAAGAAGGTGAAGTCCATTTTCTTTTTCCATCACAATCTTCTACCGTACGAGATACAATCTTAGAGC
GATATTCTCTTTCTTCAGACAGCATATGTAGGATCAAAGGTTGGGTGGCATCATTCTGTTACCAGTGGAATCTTGATCACCACTGACCGCACTTTGAGCA
ATGACACTGTTGATGGAGGTGTCTCTATAACCATTGATTCCTCCAATATCTGTGAAGCTCTTCGGAGGAGTTACTTGAGGCCCCACGGAATAGAAGGCAG
CACCGAAAGAGTTGAAGTCTGGTTTGGTTGCAGCAGAACCATCATTGGTTTGATGAGTCGGAGAGTGTTCTTGATCTTGTTTGGCCATGGAACTCTTTTC
TCCCTCAGTTTCCCTGTAGTTGTTGAGGTAGAGCTTCAAGGGTCCAACATAGTTCTCAAACCCTAAGGTTGTCATGGCCCAGAGAAGATCATCACCGTTG
ATGGTCTTCCTCTTTTCCCTCTGGCACTTGTCGGAGGCCTCACCGGTGATGAAGCTGATGAACTCAG