Detailed information on CNT30622743


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 2e-56

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30269348Cajanus cajanChenopodium quinoa87.9849.0384.58227forward

Expression of CNT30622743

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGQSSHLGRLGLSPHQEAHRQYGNPQQHPSK*

>peptide 2 (35 aa)
MENMANLPFFNSFTFNSAKASGSSARPNGSKLPPG*

>peptide 3 (85 aa)
VISKVFQRSLSSDNGLNKETKHGEHGQPTILQLFHLQLSKGLWVICKAQWVKAPTWVDWVCHLTKRPTGNTVTLNSTHQNNLGGPD

Sequence

>CNT30622743
GTGATCAGCAAGGTTTTCCAAAGGTCCCTTTCCAGTGACAATGGCTTGAACAAAGAAACCAAACATGGAGAACATGGCCAACCTACCATTCTTCAACTCT
TTCACCTTCAACTCAGCAAAGGCCTCTGGGTCATCTGCAAGGCCCAATGGGTCAAAGCTCCCACCTGGGTAGATTGGGTCTGTCACCTCACCAAGAGGCC
CACCGGCAATACGGTAACCCTCAACAGCACCCATCAAAATAACCTGGGTGGCCCAGAT