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Detailed information on CNT30269348


BLAST search results

BLAST vs Swiss-Prot:
sp|P04783|CB25_PETSP, E-value = 2e-62

BLAST vs NONCODE:
NONMTRT001605, E-value = 9e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3091866Chenopodium quinoaSolanum tuberosum60.0435.4686.33278forward
CNT30622743Chenopodium quinoaCajanus cajan49.0387.9884.58227forward
CNT30417231Chenopodium quinoaPapaver somniferum49.6830.9184.35230forward
CNT30645477Chenopodium quinoaCannabis sativa31.5338.3285.62146forward

Expression of CNT30269348

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MYIEAYKAQIVTPLIHFHYIHTKILHLPGTKLVAFSNGPFPVTIAWTKNPNIENIANLPFLISLTFNSAKASGSSAKPNGSKLPPG*

>peptide 2 (30 aa)
DYEVDFKKCYNISTQNSHFEHSFNNQTHVH*

>peptide 3 (31 aa)
MGQSYPRGKVDRLLHQVDHRQHGNPQRHPSR*

Sequence

>CNT30269348
GAGACTATGAAGTTGATTTCAAAAAATGTTACAATATAAGCACACAAAATTCGCATTTTGAACATTCATTCAATAATCAAACACATGTACATTGAAGCAT
ATAAAGCTCAAATTGTTACACCTTTGATTCATTTTCACTACATTCATACTAAAATACTTCACTTGCCGGGAACGAAGTTGGTGGCGTTCTCCAATGGGCC
CTTTCCGGTAACAATAGCTTGGACAAAGAATCCAAACATAGAGAACATAGCCAACCTACCGTTCTTAATCTCCTTAACCTTCAACTCGGCGAAGGCCTCT
GGGTCATCAGCCAAGCCCAATGGGTCAAAGCTACCCCCGGGGTAAAGTGGATCGACTACTTCACCAAGTGGACCACCGGCAACACGGTAACCCTCAACGG
CACCCATCAAGATAACTTGGCAGGCCCAAATAGCCAAAATACTTTGGGCATGGATCAAACTTG