Detailed information on CNT30619636


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695362Cajanus cajanOryza sativa12.2421.9893.3360reverse complement
CNT30526086Cajanus cajanPhaseolus vulgaris40.8237.4587200forward
CNT30711470Cajanus cajanGlycine max50.6144.0589.52248forward
CNT3085655Cajanus cajanVigna radiata40.8241.7587200forward
CNT30207452Cajanus cajanHelianthus annuus14.926.1690.4173forward

Expression of CNT30619636

Peptides detected in this lncRNA

>peptide 1 (51 aa)
LIPLLLLSSNCLGFRSRRRVRFFVRHESQEEAYEETEEEAPKDETEIQVVR*

>peptide 2 (50 aa)
MDFLSLFLILCFANLSNFHSGCKMQRVYHRVVTISEYFSYSIFFKAFDSFS

Sequence

>CNT30619636
ATCTTATTCCCCTGTTACTTCTCAGCAGCAATTGTCTAGGGTTTCGGAGTCGAAGAAGGGTAAGGTTTTTCGTTCGCCATGAGAGCCAAGAAGAAGCGTA
TGAGGAGACTGAAGAGGAAGCGCCGAAAGATGAGACAGAGATCCAAGTAGTGCGTTAATCCTAGTTTATTTCTGTTGTTTTTACAATTGTCTATGTTGTC
AAATGGGACACCCAGCTGTTAGTGGCACTGGTCTCTCCCTTTTGATGTTTTGATACAATTTGTTGGGTCTTATTAGTTTATGTTTGTCTTATATTATTAG
CTGAGAACAGTTATGTTACTGCGTTTGCGAATCAAATGGATTTCTTATCTTTATTTCTGATTCTTTGTTTTGCTAATTTGAGTAATTTTCATTCTGGTTG
TAAAATGCAACGGGTTTATCATAGGGTCGTTACAATTTCGGAATATTTTAGCTACAGTATTTTTTTTAAAGCATTTGATTCATTTTCGTA