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Detailed information on CNT30616474


BLAST search results

BLAST vs Swiss-Prot:
sp|O24045|RBS_MUSAC, E-value = 4e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30176139Sesamum indicumVigna angularis42.3915.3382.04206forward

Expression of CNT30616474

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MKLMHWTWRTLSNPMILTKASGCALTASSTSSNTWAESVHPYMGNFHIVQ*

Sequence

>CNT30616474
AGCAATCAATTGACTTTTAGGAAGATAAAACAAGTTCGAATTGGGTACACTTGTTCTCAACAACAAACACCAAATCCATAAAAAATGGAGAGAAAAAACG
ACACAGAAAAACAAAGGTACAAGATGAGTCTCTTATGAATTTTAGTAGCCCGGTGGCTTGTAGGCAATGAAACTGATGCACTGGACTTGGCGCACGTTGT
CGAATCCAATGATTCTAACGAAGGCGTCAGGGTGTGCCCTTACAGCCTCGTCAACCTCCAGCAACACTTGGGCGGAGTCAGTGCACCCGTACATGGGCAA
CTTCCACATTGTCCAGTAACGTCCGTCGTAGTACCCTGGTGACCTGTGGGTGTGCCCTTACAGCCTCGTCAACCTCCAGCAACACTTGGGCGGAGTCAGT
GCACCCGTACATGGGCAACTTCCACATTGTCCAGTAACGTCCGTCGTAGTACCCTGGTGACCTGTGGTTTTCACGGTACACAAATC