Detailed information on CNT30614190


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30499788Arabis alpinaCoffea canephora3.5825.6297.5983reverse complement
CNT30342066Arabis alpinaEragrostis tef2.7222.3487.363reverse complement

Expression of CNT30614190

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MEDSNKNQLAFRIFTVKKIKGVFRESNSGQ*

>peptide 2 (35 aa)
MHCQKSQWGIQRIELGTSRTQSENHTTRPNARLLM*

>peptide 3 (36 aa)
MGKLCLHTKHALSKKSMGHSENRTRDLSHPKRESYH*

>peptide 4 (36 aa)
MRYYIGLLNTCGNSMLSDCHSSYKLVKAKLKSVNCIL

>peptide 5 (38 aa)
MELKHFLVDVLMERSLLVRRICATLPNISLHFGTCFCS*

>peptide 6 (39 aa)
MLAYQTCTVKKVNGAFRESNSGPLAPKARIIPLDQMPGC*

>peptide 7 (62 aa)
MAPVRFKPKSCLFFQSYLRLILTYYNHRGRGRDWTHLLMLLRFSNRFCIRECRTRLLIYMDS*

>peptide 8 (94 aa)
MSAKYIGIPDKCQSLQFHRRFLRQSTMRNYGNLYGSGEVQTQELSLLPKLFASHSHLLQPQRQRKRLDSLVDVVAFLKPFLYKGMQNQATNLYG*

>peptide 9 (43 aa)
MLYVKTSTISKAHSWRNWHHLRCSCEGSRRSLFCANLTQLSRK*

>peptide 10 (31 aa)
MWFLVYRWCIVKLNMIFENWAPKDMLVTNKI*

Sequence

>CNT30614190
AACGCTTTCATATTTTGTCTAAAATAATATAATTTTCCATGAGTGCCAAATATATAGGTATCCCGGACAAGTGTCAATCTCTGCAATTTCACCGCCGCTT
TCTTCGCCAATCGACGATGCGAAACTACGGGAATCTCTATGGCTCCGGTGAGGTTCAAACCCAAGAGCTGTCTCTTCTTCCAAAGTTATTTGCGTCTCAT
TCTCACTTACTACAACCACAGAGGCAGAGGAAGAGATTGGACTCACTTGTTGATGTTGTTGCGTTTCTCAAACCGTTTTTGTATAAGGGAATGCAGAACC
AGGCTACTAATTTATATGGATAGCTGAAGGTGTTGAGTTCTTCTTCCGCCTTGCCGGGACATTTGTGACAATTTTCCATGAATCTTATGATAACAGAAGA
TCGCTGGAGGTGTCTCCATTTGGTCATGGCTCAGCATTCTGCTTGTGTTATCTGAATGGAACTTTTTTAAGACAAGTGTTTTTATGCAAATCTGAATTAC
CTGACCTGAAAGCCAAGCAATAAAAGACATGGAAGACTCAAATAAAAACCAGTTGGCATTCAGAATTTTCACTGTTAAAAAAATCAAAGGGGTATTCCGA
GAATCGAACTCTGGACAGTAACATGTAGCATACTTGTTGGATTATTTGGTTGGATCAAGAAGAACTGATTTATGTCAAAGCCAAGCTCATTCTTGAAGAT
ACTGGTAGCACCCACTTTGAAGTAGTGAGGAGTGTCTGATGTTATCTGGTTACGATATATCCAGCAGTGTTTTTTGAAAGTCAACCATTAGTAAAGGTAT
GTGGTTTCTAGTTTACCGCTGGTGCATTGTTAAGTTGAACATGATCTTTGAAAATTGGGCACCAAAGGACATGCTTGTCACTAACAAAATTTGATTGACA
TACCGGACATACGCTGTTGAAAAAGTCAATGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGT
CCTTATGTTGATATATTTAGTTAAAATAGCATGAAAGCTTGTGAAGTCAATGGCAGATCTAGTTCCCTTAGTGGGCTTAGGGATCAAATATATTAGTAAT
CTTAGCCATCGGATCGGATGACAATAATGCAATTTGGTTCTTGTTTTCATAATTGACTTTTAACAAATACTCAATCTTGAAAGTCGTCAATATTGTCTAA
TGTCTGAGATCTGAATGTAAGATGCCTTTTGATGTTTGGGGAGTGAAACATTCTGATGACTAGAATTTGCTTAGGTATTATATCTGTCGATTTGCGTATA
TCTTACTCATGATCTTGTTAATAACTTAGGCATTGTACGGCATAGTTTTATGACAGTAGGGAGTGGTATCTGATATTATCTGGTTGGAACATTTTAAGAG
CTTTCTTTGTGCAAGTGGGCTGGTTAATTGTTAAACTGACCCGTGATCTTTAAAAATATGGGGAAATTATGCTTGCATACCAAACATGCACTGTCAAAAA
AGTCAATGGGGCATTCAGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCGGTTGTTGATGTGAATATTCA
AACATATTTGTGAGTACCTTTGGTTTCTGGTGAAAATTTTCCGGGCATTGAATAGTCACGTCAACAACCGCGTATTTGATGATTCTGGCAACACGCAATT
GGGATTGTGGCCTATGGATTTGGATCAGAAGTTTCTGTTTATAGATTTTGGTTGCTAAGGCAATCCTGTTCATCTGATGCAAAAGCAAAGTTGCTAGAGC
TCATTCTTGAAAATACTGGTAGCACCACTTTGAAGCAGTTAGGATACTTCCAGCAATGTTGTATGTGAAAACTTCAACCATAAGTAAAGCTCATTCTTGG
AGAAACTGGCACCATTTGCGTTGTAGTTGTGAGGGTTCAAGAAGAAGTTTGTTCTGTGCAAATCTAACTCAGCTGAGCCGAAAGTAAAGGTGATGGAACT
AAAACATTTCCTGGTTGATGTACTAATGGAAAGGTCTTTGTTGGTTCGAAGAATATGTGCCACTCTCCCAAACATAAGCTTGCATTTTGGAACTTGTTTT
TGTAGTTGACTTTGATCTTATAAGCAATCTTGAAGTCTCCAAGTACACATACCAGGTATCATCAGCTTATTTAGAATCCCTAGGTTGATGATATTTTAAT
GTTTGCGTATGAGATATTACATCGGGTTGCTAAATACTTGTGGGAACTCTATGTTGTCTGATTGTCATAGCTCATACAAATTGGTAAAAGCCAAGCTGAA
AAGTGTAAATTGCATTCTTA