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Detailed information on CNT30613023


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30650833Arabis alpinaRosa chinensis10.8524.0991.7873reverse complement

Expression of CNT30613023

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MASGEDFGGPIKRWMRGSSTHENPLRFPFDLVVLSLCSAFIFRSLW*

>peptide 2 (48 aa)
MGLVKCFQWGLFSSSEVQIRFCQKIGDAGNRTPCLSHAKRALYHMSYTP

>peptide 3 (37 aa)
MLCLHISVSVVKGVASTMFQNRYYLFRMTKKEKRMTA*

Sequence

>CNT30613023
GAGAGAATGAGTGAATGACTACGAGAGAGAAAATTACGTCCAGCCGCCAAGGGTGATTTTTCTCCTTTTCCTCGTCGATTCCAGATCTGATCGGTACTGG
TGGCTCCGTTAGCACCGGTACCGGTCCCTTTCGTTGTTTTTCCTAGCTTTTTCTTTTTATTGTTAGGTTTTCAGCGTAGAAGAGAGATTTTTTTCTTGTG
ATATGAGATCTGAATCGGTTGTGAAGTTTCGGGGTTAGTTTCGGGTTGAGTCCGGGTTTGTGGGGATGGCTAGTGGTGAAGATTTTGGTGGTCCTATAAA
GCGGTGGATGCGCGGGTCTTCTACACACGAGAATCCCTTGCGTTTTCCGTTCGACCTCGTGGTATTGAGTCTATGCTCTGCCTTCATATTTCGGTCTCTG
TGGTAAAGGGTGTTGCCTCGACTATGTTTCAAAATCGCTATTACCTCTTTAGAATGACAAAAAAAGAGAAGCGAATGACTGCTTGAAGAAGTAAAAAGAT
TAAAACCAATCACACCCTTTGGTTTTATGGGCCTCGTGAAGTGCTTTCAATGGGGCTTATTTAGTAGTAGTGAGGTCCAAATCAGGTTTTGTCAAAAAAT
TGGAGATGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCC