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Detailed information on CNT30611129


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30403020Arabis alpinaBeta vulgaris7.5827.1110074reverse complement
CNT30653503Arabis alpinaRosa chinensis7.4828.8510073reverse complement
CNT30342067Arabis alpinaEragrostis tef7.2721.0787.3271reverse complement

Expression of CNT30611129

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MEQTLLDASLMRIGGKDERLFPESCSHNRLTSLVLLEEEHKDDDTSYTTDSL*

>peptide 2 (32 aa)
MVFCTFLKGICCTNFNHCVMRFDCCCRIFASY*

>peptide 3 (36 aa)
MTLHIQLIPCKFCKDLSVCWDISGQWGRFLLFHHLG*

>peptide 4 (30 aa)
MRDAQFSISREGFVVCTLFSNEASPLSIGI*

Sequence

>CNT30611129
TAATAATGAAATTGTAAGGTGCTTTCAATCTTTATTTTTCCTTGGTGAAATGAAAGAGTAATATGGTCCTCATTTGGGACAATATTTATGATAAAACTAG
GGCTCAATAAAGATCGGATTTTCTTAGCAATTTTCTTCTTGCATTTAGTCATTTAGATCATCTACGTAAAAATAGTCAATCGGGGCATTCCGAGAATCGA
ACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCTGATGTTTATTCAATCTGGTTCAAACATTTTCTATGGTTTTCTGTAC
TTTCTTGAAAGGAATCTGCTGTACAAATTTTAACCATTGCGTTATGCGTTTTGATTGTTGCTGTAGGATCTTTGCAAGTTATTAACTGTTGAGAACTTAT
ACACTCTCTCTTTTAAAATCTAAATACCCTCTGGTAAGACCTGTTTTAACGCCGACAAAGCATGCTTCTTCTTTTCGTGATTATTTTAGGTTCTGAGCAG
TTGGTTCTCTGCTTTATGTGAAGCCTTCTGTTCTTATGAGAGATGCACAATTTTCCATTTCTAGGGAAGGTTTTGTTGTGTGCACGTTGTTTTCCAATGA
AGCATCCCCTCTGAGCATAGGAATCTAATGGAACAAACTTTGCTTGATGCATCCTTGATGAGAATCGGAGGTAAAGATGAACGACTTTTTCCTGAATCAT
GTTCTCACAATCGACTAACGAGTCTGGTTCTGCTAGAAGAGGAGCATAAAGACGATGACACTTCATATACAACTGATTCCCTGTAAATTTTGCAAGGATC
TTTCTGTTTGTTGGGACATCAGTGGACAGTGGGGGCGTTTCCTTCTTTTTCATCACCTTGGTTAGTCTTTTGCTACTGAGTTGTCTAGTTATGGACATAA
TCTTATCTTACAGTGTAGAGATTGTATTTTGATCAAAGTTATGAAAGTAAAACTTGCCACATTGAGCGTTGACATG