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Detailed information on CNT30599516


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619219Fraxinus excelsiorSesamum indicum12.0227.4387.162reverse complement
CNT30494023Fraxinus excelsiorOlea europaea14.9224.2990.9177reverse complement

Expression of CNT30599516

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MVIPLIEKSASFQLQIWCKMPAFIFTLLVNKYVWFFLSFVNTNISI*

>peptide 2 (53 aa)
MAMTLQLEGDTKGSVRGADGSGKKDMIGTQLGSDAQFVHQGSFTPGLSYTFPN*

Sequence

>CNT30599516
CTTCAATCTGACTCTTGACTTTTTTTTTGTTTGATCGATTTCGTGGAATGGCTATGACGTTACAGTTGGAGGGTGACACCAAGGGATCTGTCCGGGGTGC
TGATGGATCTGGGAAGAAGGATATGATTGGAACTCAGCTTGGATCTGATGCACAGTTTGTTCATCAAGGTTCTTTCACACCAGGGTTAAGCTATACATTC
CCTAATTGAATTGAATTATGGTAATTCCATTGATAGAGAAAAGTGCAAGTTTCCAGCTTCAGATATGGTGCAAAATGCCTGCCTTCATATTTACCCTTCT
AGTGAACAAGTACGTTTGGTTTTTTTTGTCATTTGTAAATACTAATATTTCTATTTAAGCATCTGTGATTGTGGCCACTATTTATATGATTTAGTGACTG
TTTAGTTGGGTTTTGAAGTTAAGAATTTATTCGTAAAGCCAACGTTGTATTCTATACATATACATTGTACAGTGAGTAAATACGTGTCTCACTATGCATA
AAAGTGAAAACAAAAT