Detailed information on CNT30494023


BLAST search results

BLAST vs Swiss-Prot:
sp|Q67XJ2|NFYBA_ARATH, E-value = 4e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619222Olea europaeaSesamum indicum41.0163.4188.46130forward
CNT30612363Olea europaeaArabis alpina27.1312.4587.2186reverse complement
CNT30599516Olea europaeaFraxinus excelsior24.2914.9290.9177reverse complement
CNT30717318Olea europaeaMalus domestica golden21.4531.7885.2968forward

Expression of CNT30494023

Peptides detected in this lncRNA

>peptide 1 (30 aa)
SKYIMPTKKIQNLPVYQIQAEFHKLPVYQN*

Sequence

>CNT30494023
CTCTAAATATATAATGCCGACAAAGAAAATTCAAAACTTACCTGTGTATCAGATCCAAGCTGAGTTCCATAAGTTACCTGTGTATCAGAACTAAGCTGAG
TCCCAACCATATCCTTCTTCCCAGATCCATCACCACCCCGGGCAGATCCCTTGGCCCATTCCACGAACTCTCTGTACCTAGCCAAATAGGCCTTGAGTGG
AGCAATGTAATCTTCAAAACCTAAAGTTGCCATTGCCCAGAGCAAATCATCCCCATTAACAGTTTTCCTTTTCTCTTTTTGACACTTGTCGCTTGCTCTA
CACAACATAACAAATTG