Detailed information on CNT30596551


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30107015Oryza meridionalisOryza longistaminata10013.89100216forward
CNT30576933Oryza meridionalisOryza barthii1008.59100216forward

Expression of CNT30596551

Peptides detected in this lncRNA

>peptide 1 (45 aa)
QGPGRTAWSALKVLVRAPRAGASRMMVAGIEGRGWRRNGWAWQLW*

>peptide 2 (51 aa)
AGSGPHGLERTQGARPCASGRREQDDGGGDRRARMEEEWLGMATLVAIVFA*

Sequence

>CNT30596551
GCAGGGTCCGGGCCGCACGGCTTGGAGCGCACTCAAGGTGCTCGTCCGTGCGCCTCGGGCCGGCGCGAGCAGGATGATGGTGGCGGGGATCGAAGGGCGA
GGATGGAGGAGGAATGGTTGGGCATGGCAACTCTGGTAGCCATAGTTTTTGCTTGATTGTGGATGGCTTCGAGGATAAGGAATAGAGCGAGGCTTCGAGG
ATAAGGAACGGCACAG