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Detailed information on CNT30595021


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 3e-160

BLAST vs NONCODE:
NONTPRT002153, E-value = 1e-94

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067391Eragrostis curvulaLeersia perrieri93.4432.1387.57684forward

Expression of CNT30595021

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSEDSTSKVMVLPVRVFTKICIPPRRRRTRCSVDSFWML*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWIFTLTLSIVSEDSTSRVMVLPVRVFTKICIPPRRRRTRCRVDSFWML*

>peptide 3 (48 aa)
MQGGLLLDVVISQGPSILELLPSKDKALLVGRNALLVLNLCLDIVNCV*

Sequence

>CNT30595021
AGTGACCTGAATATAAAGATGCAAGCCAACCAGCAGTGAGCTCAAAAGCCACCACGCAGGCGAAGGACAAGGTGGAGGGTAGATTCCTTCTGGATGTTAT
AATCTGCCAAGGTGCGCCCGTCCTCCAACTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCTTTCAC
ATTGTCGATGGTGTCTGAGGACTCGACCTCCAAAGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATTCCACCACGCAGGCGAAGAACAAGG
TGCAGTGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTGCGCCCGTCCTCAAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCTGGGGGGATGC
CCTCCTTGTCTTGGATCTTCACCTTGACATTGTCAATTGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTG
CATACCACCACGCAGACGCAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAGGGTCCTTCCATCCTCGAGCTGCTTCCCAGCAAAG
ATAAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTGTCAATTGTGTCTGATGACTCCACCTCAAGGGTGATGGTCT
TGCCAGTGAGTGTCTTCACAAATATCTGCATC