CANTATAdb - search

Detailed information on CNT3067391

BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 4e-110

BLAST vs NONCODE:
NONMEST001181, E-value = 9e-104

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30641434	Leersia perrieri	Nymphaea colorata	32.08	64.49	85.65	683	forward
CNT30143304	Leersia perrieri	Lolium perenne	31.24	67.38	88.27	665	forward
CNT30595021	Leersia perrieri	Eragrostis curvula	32.13	93.44	87.57	684	forward
CNT30604086	Leersia perrieri	Oryza punctata	30.95	67.04	86.19	659	forward

Expression of CNT3067391

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVLPVRVLTKICIWKRQQRQELKSTSMLK*

>peptide 2 (50 aa)
MPSLSWILAFTLSIVSEDSTSKVMVLPVRVFTKICIPPRRRRTRCRVDSF*

>peptide 3 (34 aa)
ISPQFKHLRTITELQRLIASVGIDAIKQIVLAWG*

>peptide 4 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSNDSTSKVMVLPVRVFTKICMPPQRRRTRCRVDSFWML*

Sequence

>CNT3067391
AAATCTCACCTCAATTTAAACATCTCAGAACAATCACAGAACTGCAACGATTAATAGCATCAGTTGGTATCGATGCAATTAAGCAAATTGTACTAGCATG
GGGATAATGTTTGTCCAAACCTTATAGGCAACATCTCAAGGGACTAAAAACACATTAACCATAAAACAGAAACATGACACGACGATAGGACAGACGAGCG
GGATAACTGACGTAAAAGCCAAATGCTGCATCACAGCCCTCACAGACCACCACGGAGCCGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTATAG
TCGGCAAGGGTGCGCCCATCCTCCAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGT
TGTCGATGGTGTCAAACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATGCCTCCACAAAGGCGAAGGACAAGGTG
CAGGGTTGATTCTTTCTGGATGTTATAATCAGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCTGGGGGGATGCCC
TCCTTATCCTGGATCTTGGCCTTCACATTGTCAATTGTATCAGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTCACAAAGATCTGCA
TTCCGCCACGGAGGCGCAGGACAAGGTGCAGGGTGGATTCCTTCTGAATGTTATAGTCCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATAA
GGTGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATCGTGTCGGAGGACTCTACCTCCAAGGTGATGGTCTTGCC
AGTGAGGGTCTTAACGAAAATCTGCATCTGGAAGAGGCAACAAAGACAGGAATTAAAATCAACATCAATGTTGAAATAATGCAGCTGGAGCATAAGTTGG
CATCAGATTCTAGGATTTATTAAAAATCAGCCCACAAGACTGACATATCAATCACTTCATATAACACCACAATAGGGGCATGAATCATAAGAGCTACTCA
CATCTCATTATTCAGATAACATAAGTCACTATAGGACAAGGCGGATCAATGTCAGAAAAACATAATAGAACATAGAAAACTAGTTGTAGCATACTAGCAT
CCAACATGGTTTGCACATGAGTGAAGCAACTAAAACAGGCGAAACACAGTAAGCTTTTCAGTTCTGAATCCAACAGATTCATAAATTTGCAAATTAATGA
AGCAACTAAAACGGGCAAACACAGTACAACATCTACTCTAAGATTCAAGTAGCCAAAGTGACATAAACGATATACAAAAATAACTTCATGGATCATCATT
TACACGAGGGAAGCAACTAATATGTAAGTACAGCATAAGCTCTACGATTCAAGTTGGCATTCATGATATACAGATGTAGTAAGCTTCACACTATTACCAA
TCTAAATTAAGCACAAATCGAAGGAAAACTCAAGCCGTCACAGAACTAACAATCTGGCGAGATTGCAACGGAACTATGAACCATTCATCTATCATCTACT
GGAGCTATATCGAAAAAAAAAAGACATCTAAACTAATCACAAATCGAAGGGAAACTTAATCTGACCGTCACAAAATTCAACAGGCAGGCGTAATTGAAAC
AGAACCATGACTATCCATCCATTAGAGCAATATCGAAACAATCCCATGCGTCAGAATAATCTCAAAACCGATCCATCTATTAGATCGATCTAAAATCACA
CAAATCCCAAAATAGATCAAGTGATGAGCCCAAATCGTACAAAACTAAACTCGATTATAAGGATCAGCCCTAGAATTGCATAACAAACCCTAACTCGATT
TACGATCAGTATTAAGAGGATCCGCCTAGAATCACAAGAAACCCTAGCTCGATTAGGACGACTATCGATTAGAAGCGCATCACGAGAGATCAGACCAAGA
TTAGACTGGGCATCGCGAGAGATTAGAAGAGGATCGAGAGAATCCAGAAGGGGATCGGGTTACCTTGACGAGGCGATTAGAGAAAGAAACAGGCTTCGCT
TCGCTTAATCGCTTCCCCTTCTGCCGATG