Detailed information on CNT30591859


BLAST search results

BLAST vs Swiss-Prot:
sp|P38415|LOXA_SOLLC, E-value = 1e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30344859Musa acuminataEragrostis tef23.5516.6281.82110forward

Expression of CNT30591859

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MWAAVIVLVWSPYLQGSSLLVGGNSSRRLMTTGFK

>peptide 2 (37 aa)
LPDRSFHAAFSRCVHLADGAMLLSVLVRQAELDRQWL*

>peptide 3 (44 aa)
MHGESVKVVLYVGCSYRAGMVAILARIKLARGRELLETPDDHRVQ

>peptide 4 (36 aa)
MKSLFCSSAFRREERNTMKQDYFATATCITPDKLLT*

>peptide 5 (36 aa)
MMIQDEELVLLQCLQEGGKEHDEARLLRYRYMHHTR*

Sequence

>CNT30591859
CTGCCAGATCGATCCTTCCACGCCGCTTTCAGCCGGTGTGTACACCTTGCTGACGGCGCCATGCTGCTCTCCGTCCTGGTGAGGCAAGCTGAGCTCGATC
GCCAATGGCTTTAGCGTGGAGTCCTGCCTCAGGTACAGCAGAGTTCTGGTGGCATATACTTTGACGGCGAGAGCGTTGATGCGGTTGAGGTAGGGGATGT
ATGCATCATGATGATCCAAGATGAAGAGCTTGTTCTGCTCCAGTGCCTTCAGGAGGGAGGAAAGGAACACGATGAAGCAAGACTACTTCGCTACCGCTAC
ATGCATCACACCAGATAAGCTTCTCACCTGATGCACGGTGAGTCCGTCAAGGTGGTGCTCTATGTGGGCTGCAGTTATCGTGCTGGTATGGTCGCCATAC
TTGCAAGGATCAAGCTTGCTCGTGGGAGGGAACTCCTCGAGACGCCTGATGACCACCGGGTTCAAAC