Detailed information on CNT30589376


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30229651Musa acuminataAnanas comosus10.9220.3797.7344forward

Expression of CNT30589376

Peptides detected in this lncRNA

>peptide 1 (34 aa)
ISYPRYYQANPNLNRCYSRFRHLLALTNFHSSQI*

>peptide 2 (42 aa)
MVPVVDGGGVGLGLVEQVGAEGVVGVCGIDRDRWYLLPLLSPS

>peptide 3 (80 aa)
MLLPIQAPTSTHQFPLLTDLICVSRKAHISSAMGALCFATVQPAVVRKHTSRNKLGIIYTIDMDGREEGGRRRVVVWYQS*

Sequence

>CNT30589376
CCATATCATATCCCAGATATTACCAAGCAAACCCAAACTTGAATAGATGCTACTCCCGATTCAGGCACCTACTAGCACTCACCAATTTCCACTCCTCACA
GATCTGATCTGCGTGAGCAGAAAGGCGCACATCAGTTCAGCGATGGGTGCTCTTTGTTTCGCCACTGTACAGCCTGCGGTGGTAAGAAAACATACATCAA
GAAATAAACTAGGGATTATATACACAATAGACATGGATGGAAGAGAAGAGGGGGGCAGGAGAAGAGTAGTGGTATGGTACCAGTCGTAGACGGTGGGGGA
GTTGGGCTGGGGCTTGTCGAACAAGTTGGCGCCGAGGGTGTGGTGGGCGTCTGCGGCATCGACAGGGATCGCTGGTACTTGTTGCCGCTGCTCTCTCCTT
CTG