Detailed information on CNT30586233


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067329Musa acuminataLeersia perrieri18.7829.1391.8974forward

Expression of CNT30586233

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRPPLQYHTCQWQMQYYVPFVCIQPRPSLHPM

>peptide 2 (33 aa)
MGYEASIAIPHLPVADAILRSIRMYPASPQSSPH

>peptide 3 (64 aa)
LGRFLPEHCRWGSHEDNSCNDLRSRLHPQEDSIPMQSRSARTHRRSSMWYSLGRCSSYHRLWVA*

>peptide 4 (65 aa)
MRTTAVMIFAAGCILKRTASPCKAGAPVLIDAAACGTLWAGVVVITDCGWLNRGRCSSYHRRWVA*

Sequence

>CNT30586233
CATTAGGCAGGTTCCTTCCTGAACATTGCAGATGGGGTAGTCATGAGGACAACAGCTGTAATGATCTTCGCAGCAGGTTGCATCCTCAAGAGGACAGCAT
CCCCATGCAAAGCAGGAGCGCCCGTACTCATAGACGCAGCAGCATGTGGTACTCTCTGGGCAGGTGTAGTAGTTATCACAGACTGTGGGTGGCTTAACAG
GGGAAGGTGTAGTAGTTATCACAGACGGTGGGTGGCTTAACGGGGGAAGGTGGAGATGGACCAGGGTTTGGTGGGTTCTGGCCCTTCTTAATGGGGTATG
AGGCCTCCATTGCAATACCACACTTGCCAGTGGCAGATGCAATATTACGTTCCATTCGTATGTATCCAGCCTCGCCCCAGTCTTCACCCCATGA