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Detailed information on CNT30584447


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519659Echinochloa crusgalliSetaria italica24.0425.7787.06201forward

Expression of CNT30584447

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MRSLLATSPLSLSPHRTKHWWRRRTGAQHGFL*

>peptide 2 (83 aa)
MPHLLTLGRAPPAACCSSSPGTSPTRRKWWPDAEFARDLASVVVASSDQALVAPSHRRAARISLGLRDFTAEVRGKGGAVGLRR

Sequence

>CNT30584447
TGTCGATATATTTAGAATGATGATGAATCAAAAAGTAGCATACAATCTTCAGAAACTCCACTAGAGATTACATAAACAGTTGCTGCATTATTTCACGAGT
TAGGTTCAAGAACCAAAGAACTCAAACCATGTTGAGTTGCTACTGCAGTACTAATAGTACTAATCAAAAAGCATATGAGCTAACAGATTAAATCTACTGC
ACTCAAAACGATAAGCTACATAAACTAGTACAATTGAGTTCGAGTTTCCGAACAGCTACACATGTATATATGACAAAAATTTATTCTTCCAGGTTATCGA
TCTGCAAATGAGATATGAAAAAAAACAGCTAAATTAATGATGTAATAAACCTGAAGAAAAATTAACTTGAGCGCCTAGCTACACCTCGACGCTGCATCCC
GTGGGTTGCGCGAACTGGAGCACCGACACGGAGACATTGGATCAGCCGCCGGAGAACCGCACTGAGAGCACGTCGGGGCAGCTGACGAAGAGGTAGTAGC
TCCCGGAGACCCGGCTTCCGACCTTCCACTTGAGGCGGCCGTCGACCTTGACCTGCAGCGCGACGAACCCGGCAACCCTGCCATGCCGCATCTGCTCACC
TTGGGAAGAGCACCGCCGGCTGCGTGCTGCTCCAGTTCGCCCGGCACCTCACCTACCCGGCGCAAGTGGTGGCCTGATGCGGAGTTTGCTCGCGACCTCG
CCTCTGTCGTTGTCGCCTCATCGGACCAAGCACTGGTGGCGCCGTCGCACCGGCGCGCAGCACGGATTTCTCTAGGTCTACGGGATTTCACAGCGGAGGT
GAGAGGGAAGGGAGGCGCCGTCGGTCTACGGCGAAG