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Detailed information on CNT30583095


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SY97|LHCA3_ARATH, E-value = 7e-67

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30441391Echinochloa crusgalliAegilops tauschii28.3248.3889.37254forward

Expression of CNT30583095

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MNTIMHDATRLKPTVHQPAASMHMIEQRHIIIMYVSLPLHSNIMQ*

>peptide 2 (69 aa)
MKPPVPSGSDRAGAGPDDEGRLPGRRPGDGRLDGAAEKLAPGEESLSRHGSRTLACCLLPTRRAAAAVSA

Sequence

>CNT30583095
CTCGGCAAATGTCGGGTTTCCCGTAGTGGATGAAATAACACTTCATTATTTCACTCATACCATAACTAGAGATATTTGATCAGAATTGTACATCGATTTA
CCATGTGCAATGTCTCAATTAACAGGATCGATTACTAATTTGTTACAAGCAGCTAGCGTGCAGGCCGGCCAGCGATATATATGAATACAATCATGCATGA
TGCAACACGCCTCAAACCCACTGTCCATCAGCCAGCAGCCAGCATGCATATGATCGAACAACGACACATCATCATCATGTACGTCTCGCTCCCACTACAC
AGCAATATAATGCAATAATCCTCTAGTGGAACTTGAGGCTGGTGAGGACGTTGTTGTTGACTGGGTCTGCCAGGTGGTCTAGCAGGTTCTGGAACGGGCC
GAGGAAGTACTGCTTGCCCATGGACCCCGGGTTGTACCAGTCCTGGAGGCGGCGGTGCTCGGCGAAGCCCATGAGCGCCATGTTGAAGACGAAGAGCGTG
TAGGAGTCGGCCCAGTAGTCGTAGGTGCCCGCCGGCGGGATCACGCCCGTCTTGAACCACGGCAGCGCCGTCTCCGCCGGGATGATGCCCAGCTTGCCGA
AGATCTCGGGGGCGATGGCGCCGAACGCGCCGAGCATGGCGAACCGCCCGTTGATCACCTCGCCGTAGGCCAGCCACTTGGGCTCGATGAAGCCGCCGGT
GCCCTCGGGGTCGGACAGGGCTGGAGCTGGCCCTGACGACGAAGGGCGCCTTCCTGGCAGACGACCGGGAGACGGCCGACTGGACGGGGCGGCCGAGAAG
CTGGCGCCCGGAGAGGAGAGCCTGAGCCGCCATGGATCACGTACGCTAGCTTGTTGCTTGCTTCCGACAAGGCGCGCTGCTGCTGCGGTATCTGCGG