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Detailed information on CNT30580696


BLAST search results

BLAST vs Swiss-Prot:
sp|P13869|CB12_PETHY, E-value = 4e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3053136Echinochloa crusgalliAmborella trichopoda60.0832.584.62143forward

Expression of CNT30580696

Peptides detected in this lncRNA

>peptide 1 (78 aa)
VPDVGAGELVAGEDGLDEEEGGGVGEVLLLAGGVPEGGVEDADLGQELRDEDARRAEHRPPAVHQLRLHVPPQALRVRS

>peptide 2 (77 aa)
YPTSVPVSLLLGKMGSMRKRVVVSVKYCCSPAVYQKGVLRMPILVRNSGMKMPAAPSIAHRQCTSSACTFHRKLSGSD

Sequence

>CNT30580696
GGTACCCGACGTCGGTGCCGGTGAGCTTGTTGCTGGGGAAGATGGGCTCGATGAGGAAGAGGGTGGTGGTGTCGGTGAAGTACTGCTGCTCGCCGGCGGT
GTACCAGAAGGGGGTGTTGAGGATGCCGATCTTGGTCAGGAACTCCGGGATGAAGATGCCCGCCGCGCCGAGCATCGCCCACCGGCAGTGCACCAGCTCC
GCCTGCACGTTCCACCGCAAGCTCTCCGGGTCAGATCC