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Detailed information on CNT30580032


BLAST search results

BLAST vs Swiss-Prot:
sp|P12331|CB22_ORYSJ, E-value = 1e-125

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440203Echinochloa crusgalliAegilops tauschii31.6843.0693.36301forward

Expression of CNT30580032

Peptides detected in this lncRNA

>peptide 1 (63 aa)
YIKNLQLDAYFIDPVQNMRTNTLLVHSSLRSQGSHHTYLYTLQYIRIRTSTVHARDPTHGRFI*

>peptide 2 (95 aa)
ILKIYNWMHISLIPSRTCVQIHYWYTAACDPRAPITHTCTPCSTYEYVRLRYTHATPPTVASSRVATRHPHHSCPASSSLTCRGRSWWRRPMRCC*

>peptide 3 (53 aa)
MVMRPSPKTSLAPVAGLLTRAREVRAMVAAAMSIGSDHSLLWMMRCSVLCSSVM

Sequence

>CNT30580032
TATATTAAAAATTTACAACTGGATGCATATTTCATTGATCCCGTCCAGAACATGCGTACAAATACACTACTGGTACACAGCAGCCTGCGATCCCAGGGCT
CCCATCACACATACTTGTACACCCTGCAGTACATACGAATACGTACGTCTACGGTACACGCACGCGACCCCACCCACGGTCGCTTCATCTAGAGTAGCAA
CGCGTCATCCACACCACTCATGCCCAGCCTCGAGCTCGCTCACTTGCCGGGGACGAAGTTGGTGGCGTAGGCCCATGCGTTGTTGTTGACGGGGTCGGCG
AGGTGGTCGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAAGGCCTCCGGGTCGTCGGCGAGGCCCAGTGGGTCGAAGCTGCCGCCGG
GGTACAGAGGGTCCACCACCTCCCCGAGCGGGCCGCCGGCGATGCGGTAGCCCTCGACGGCGCCCATGAGCACCACCTGGCAGGCCCAGATGGCCAGGAT
GCTCTGCGCGTGGACCAGGCTCGGGTTGCCCAGGTAGTCCAGCCCGCCCTCGCTGAAGATCTGGGAGCCCGCCTTGAACCACACGGCCTCGCCGAACTTG
ACGCCGTTGCGGGCCAGGAGCTCCGGGAACACGCAGCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCACCGGTCAGGTAGCTCGGGGGCTCGCCGG
AGAGCGGGCCGAGGTACAGGACGCGGTCGGGCCCGTACCACGGGCTGCCGGACGCTGCCGGTTTGGGCTTGGCAGCGGTCTTGCGCATGGTGATGCGGCC
CTCGCCGAAGACGTCCCTGGCGCCGGTCGCCGGCTTGCTGACGAGAGCGCGGGAGGTGAGAGCCATGGTGGCGGCGGCCATGTCGATCGGATCAGATCAC
TCCTTGCTGTGGATGATGCGTTGCTCTGTGTTGTGTTCTAGTGTGATGAT