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Detailed information on CNT30440203


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 2e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30589825Aegilops tauschiiMusa acuminata42.6357.0988.93298forward
CNT30580032Aegilops tauschiiEchinochloa crusgalli43.0631.6893.36301forward

Expression of CNT30440203

Peptides detected in this lncRNA

>peptide 1 (44 aa)
QLLISNRPHMQHLSVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 2 (39 aa)
NSSSRIALTCNIYQSGLLNLRTGRSRDRRRHTCSSIHQP*

>peptide 3 (71 aa)
MHQAGVAEVEHAVGAVPRAAGRRHLGLARRLAHGDAALPEGRRPGGLHRCARHRRGGERHGRGRHRALRTR*

>peptide 4 (66 aa)
TPHLESPSHATSISPDYSISEREEAEIDDDTHAAASISHEVVGLEVELTALTCRGRSWWRRPRRCC*

>peptide 5 (52 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLASFASGELRLTVGL*

Sequence

>CNT30440203
CAACTCCTCATCTCGAATCGCCCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGC
AGCAGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGGTTGAGCTGACTGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGT
TGACGGGGTCGGCGAGGTGGTCGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAAGGCCTCGGGGTCCTCGGCGAGGCCCAGGGGGTC
GAAGCTGCCGCCGGGGTAGAGCGGGTCCACGATCTCGCCCAGCGGGCCGCCGGCCACGCGGTAGCCCTCCACGGCGCCCATCAGCACCACCTGGCAGGCC
CAGATGGCAAGGATGCTCTGCGCATGCACCAGGCTGGGGTTGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGG
GCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCCCCGAAGGGCGCCGCCCTGGAGGCCTTCACAGGTGTGCCCGCCATCGCCGGGGAGGAGAGCGC
CATGGTCGCGGCCGCCATCGCGCGCTGCGTACTCGCTAGCTTTGCTTCGGGCGAGCTGAGGCTGACAGTAGGACTGTAGGAGGCGCTGGTGGTCGTTGG