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Detailed information on CNT30579368


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30465831Echinochloa crusgalliSaccharum spontaneum33.4132.188.49139reverse complement
CNT302733Echinochloa crusgalliZea mays25.4842.5790.57106reverse complement

Expression of CNT30579368

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MRREHFRRGKKVYGVVHNIRQLDSYLKGEKVYKLP*

>peptide 2 (31 aa)
MHKNRTRVTHHAVNGVLPFLICFEACENQSST

Sequence

>CNT30579368
GGCGCACTTATTGCAAGATGAACTCATCTGTCAAGCGATATAAATGAGAAGAGAACATTTCAGAAGGGGAAAAAAGGTATACGGAGTAGTTCATAACATA
CGTCAACTGGACAGCTACTTAAAAGGGGAAAAAGTCTATAAACTTCCATGAGCCACTAGGCAATTCTACTACGTCAATAAAATAAAAAGGGCGTACCCAG
TGCACGAAAATAAGCAACAGCTGAAACTGAAGACAGTATCAATAAATGAAGCAACTGATCTTCTGCAACCTCCACATCTACATTTGTTTCTAGCTAGAAG
ATTTCTTGGCAGAACCAAAATGCACAAGAATAGAACACGCGTCACCCACCATGCTGTCAATGGTGTCCTCCCATTTCTCATATGCTTTGAAGCCTGTGAA
AACCAGAGCAGTACCT