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Detailed information on CNT30465831


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30579368Saccharum spontaneumEchinochloa crusgalli32.133.4188.49139reverse complement

Expression of CNT30465831

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MRNGRTASTALWATRAPFFCSLVLPRNRLARNKRRWAELADGQLLCLVILSLAPAVYGFR*

>peptide 2 (33 aa)
MVFVDLNFFLYSSDDVVELPSGPYAIFVLFSSI*

Sequence

>CNT30465831
ACCTGATACTTCCATTAGAATAGAATTTTGTTACATGCTTTAAAACTGAGCCTGCATTTAAAATAGGTACTGCTCTGGTTCTCAGGCTTCAAAGCATATG
AGAAATGGGAGGACAGCATCGACAGCATTGTGGGCGACGCGTGCACCATTCTTCTGCTCTTTGGTTCTGCCAAGAAATCGTCTAGCCAGAAACAAACGTA
GGTGGGCGGAACTTGCAGATGGCCAGTTGCTTTGTTTAGTAATATTATCTTTAGCTCCAGCGGTTTATGGTTTTCGTTGACCTAAATTTTTTCCTGTATT
CTTCAGATGATGTTGTAGAATTGCCTAGCGGCCCATATGCCATTTTTGTACTCTTTTCCTCTATATAGGTAGTTGATGTACAATATGAACTGTGCATTTT
TTTCCTTTCCCCTCCGAGAGGTTCTATTCCCAC