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Detailed information on CNT30575582

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30105288	Oryza barthii	Oryza longistaminata	90.62	67.62	89.85	522	forward

Expression of CNT30575582

Peptides detected in this lncRNA

>peptide 1 (55 aa)
ASTVRVELTGMQKRRDAVRTDAYTMRSIEYKLINQLCRYTYTSRRMKHALITSWN*

>peptide 2 (41 aa)
MGRFRARSVAITPAFVAMPTHRTAPADRSRSMACPLPSFAC*

Sequence

>CNT30575582
AGCTAGTACAGTACGTGTAGAATTAACAGGCATGCAGAAAAGACGAGATGCAGTACGTACTGATGCATATACGATGAGATCCATCGAGTACAAATTAATT
AATCAATTATGCAGATACACATATACAAGTAGACGAATGAAGCATGCTTTAATTACGTCGTGGAACTGAATCATATGCATGCATATATATCTCATTAATT
TACGGGATGAAGGAGGAAATTAAGGCACGCAGATACATATGATGATTTGAACAAGGAACAAATTAGACATAGATAGATATATAGTTGTACGTGGCCTGGT
GGTCGTTCTTCGTACGTTCTTGTGTGTAGCAAGCAGTGAAGTAGAATGGAGCAGCAGCTATATTAGTTGCTGCACTGGAAGCCGGAGGGGACGGAGCGGC
CGCAGTAGTTGACGAGGAGGCTGAGGTTGATGGGGAGGTTCAGGGCCAGGAGCGTGGCGATCACCCCAGCTTTCGTCGCCATGCCCACCCACCGCACTGC
ACCTGCAGATCGATCTCGATCTATGGCCTGCCCTCTACCTAGCTTTGCTTGCTAGCCAGTGTATTCAGATACATCT