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Detailed information on CNT30568217


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30499788Actinidia chinensisCoffea canephora9.525.3197.5682reverse complement
CNT30403020Actinidia chinensisBeta vulgaris8.4626.7410073reverse complement
CNT30611088Actinidia chinensisArabis alpina8.2320.9498.5971forward
CNT30653503Actinidia chinensisRosa chinensis8.4628.8510073reverse complement
CNT30205405Actinidia chinensisHelianthus annuus8.5733.3310074reverse complement
CNT30342067Actinidia chinensisEragrostis tef7.8820.1886.7668reverse complement

Expression of CNT30568217

Peptides detected in this lncRNA

>peptide 1 (36 aa)
LDKLGHDLGSDILSLILKIKSMTNKNKRNKKKIWAE*

>peptide 2 (37 aa)
MINWGIPRIELGTSRTQSENHTTRPNALLLTVITDSF*

Sequence

>CNT30568217
CTTGATAAATTAGGACATGATTTGGGTTCTGATATTCTTTCATTGATTTTGAAAATAAAAAGTATGACAAATAAAAATAAACGTAACAAAAAAAAAATAT
GGGCTGAGTAAACTATTATGATTAATTGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCT
ATTGTTGACAGTTATTACGGACAGTTTCTGATCAGTGTTTTTTGACTGCCTGCTGTAATTGCAGTGATGTCATGTTCCGTCAGATGGCTTAGAGCTTGAA
ATGAGTACTCCCACTTGCCTAAATGTTGGATGGCTAGATCCTTATTTTAAAAAAAGTTGACCACTATATCCTTATTCCATCAAAAGTTGGTTTGTAACAA
TTGCTGGTTACAACTTACGAGCTAAGTCATTTTCTGATCTTACTGAAGTTACAGATCGTCGGACCAGAATCACTGGTATCTCGTTCAAAAAGAGGGGGGG
AAAAGTTAGAACTTTGACTTTGAAATTCGGCAGTCAAGATTCAAAATAAAATCACAGCACTGACAATAAAAAAAGGTCAGTGAATTCACCAACTCTTGTG
GGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCAATTATTGATTGTTTGTTCTTTTATTAAT
GTGTTCAATCCCAGTTGACTGAAGTTTGATATTTCAGAGTTGCTTCCTTCTATGGCACATTTCGAATCGTTACCATAACTTTGACGATTGAGATTGATTT
TATATTTTGAATACGAGTGAGATTACATATTTTCTCCTCACTTTGCTTCACATTGACATCGGC