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Detailed information on CNT30564255


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30539604Actinidia chinensisBrassica napus48.6740.5884.44347forward

Expression of CNT30564255

Peptides detected in this lncRNA

>peptide 1 (46 aa)
QTLRCVENTKHLDTNQKTIKTKAVGSATAGQAPSSGNGCSTKKPVN*

>peptide 2 (47 aa)
MMMTWEVKLAASLAGSSLELEATNPRLRSFTATFFTLKPTLSPGSAS*

>peptide 3 (64 aa)
MTPTATVCLMSLTAKVSTTMGLVGIIFTIPASPFFKNLGSFSSSFPDRLREPGHNRFQSALGGS*

Sequence

>CNT30564255
ACCAGACTCTGAGATGCGTAGAAAACACTAAACACCTCGACACAAACCAAAAGACAATAAAGACTAAAGCTGTAGGATCCGCCACCGCCGGTCAAGCACC
CAGTTCTGGGAACGGCTGCTCAACAAAGAAACCAGTAAACTAAGACAAACATGGCAAAACCACCAATCTATATCAGTAGAAATTGTAACTAATACCGAGT
TCTCGGGAAAAACTTTATTCTTCAAATAGTAGACTCCATCTGCGGTAGTAGGAACCTCCTCCACGGTTCACTTGGCACCCTTCTTGGCAGCAGCCTTGGT
GACCTTGGCTCCGGTAGGATCCTTCTTCTCAACACTCTTGATGACACCAACAGCCACGGTCTGCCTCATGTCCCTAACAGCGAAAGTCTCCACCACCATG
GGCTTGGTAGGAATCATCTTCACCATACCAGCATCGCCATTTTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTTCCGGATCGCCTTCGAGAACCGGGGC
ATAACCGTTTCCAATCTGCCCTGGGTGGTTCATGATGATGACCTGGGAGGTGAAGTTAGCAGCCTCCTTGGCAGGGTCATCCTTAGAGTTGGAAGCCACA
AATCCACGCTTGAGATCCTTCACGGCAACGTTCTTCACGTTGAAGCCAACGTTGTCACCTGGAAGCGCCTCCTGAAGAGCTTCGTGGTGCATCTCAACAG
ACTTGACTTCAGT