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Detailed information on CNT30564059


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LT78|RD21C_ARATH, E-value = 2e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30571839Actinidia chinensisVitis vinifera24.4422.5882.6598forward

Expression of CNT30564059

Peptides detected in this lncRNA

>peptide 1 (83 aa)
LFNVANGIIMRAAILSAGTAYSVSVVAAPIDEAEVKKLENAAARLGGSTVGEVPTLRRWRRRRRRWRRRWWRNGGGRIWRWGR*

>peptide 2 (31 aa)
PLQCRKWDNHEGSNTQCRYSIQRQCSRSTHR*

Sequence

>CNT30564059
CCCTCTTCAATGTCGCAAATGGGATAATCATGAGGGCAGCAATACTCAGTGCCGGTACAGCATACAGCGTCAGTGTAGTCGCAGCACCCATAGATGAGGC
AGAAGTCAAAAAACTCGAAAATGCAGCAGCACGTCTCGGTGGCAGCACAGTAGGAGAAGTCCCCACACTGCGTAGGTGGCGTAGGCGGCGTAGGAGGTGG
AGGCGGAGGTGGTGGAGGAACGGCGGGGGACGGATATGGAGATGGGGCAGATGATTCTTTAGTTGGATAAGAGGCCATGGCATTGATTGCGCAAACCCCA
TAGTCTTTGCTAGTGTTCCTTTTTATATAGGCATACCCCTCTAGTCCCCAATCTGTTCCCCATGAGTTCTTTATTATCCAATACTCTTCATCGCCTTCAG
C