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Detailed information on CNT3055626


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30237729Amborella trichopodaBrassica oleracea21.7134.591.67168forward

Expression of CNT3055626

Peptides detected in this lncRNA

>peptide 1 (52 aa)
PLSTPLFSARPPLFCSSSSAVDQPFVRSMPTPLFALSPLVFTQLSLSSDPCH*

>peptide 2 (56 aa)
MTERRTKERKKNAPKCSCCTKRRCLFLVVSECNGSYPRSLMPNTRRCMGKFHLVIP*

Sequence

>CNT3055626
CCATTGAGCACCCCTCTCTTCTCAGCACGACCACCTCTCTTCTGTTCTTCGAGTTCAGCCGTTGACCAGCCCTTTGTTCGCAGCATGCCAACTCCTCTCT
TTGCACTCAGCCCGCTAGTGTTTACTCAGCTATCCTTGAGCTCTGATCCTTGCCATTGATCTTGAGGTACGCTATTGACTTTATTCTCTCTGTGTTAATG
ATCTCTGTGTTTGTTCTTGAGCTCTTGAAGCAAAGAGCTCTTATTCTCTGTGTTTGTTTTTGAGCTCTTGAAGCAAAGAGCTCTGGTGAATTTATTTCTC
CTCTTTCTCTCTCTTCGCTTGCCCTCTGCTGCCAAATCTCTCTGTATTTCAGGAAAGGATGAACGAGAAGGCCCCCTGAGATTTGATAAAAGGAAGGTGC
ATTAGCGGTTAATACGTTGTAATTGGATAAGTTTTTTGGAATATGACGGAACGAAGGACGAAGGAAAGGAAGAAGAATGCACCAAAATGCAGCTGCTGCA
CCAAACGCAGGTGCTTGTTTCTTGTTGTAAGTGAATGCAACGGGTCTTATCCAAGGAGCTTAATGCCAAACACAAGAAGGTGCATGGGTAAGTTCCACTT
GGTAATTCCTTGAGATGAGTAATTTAGAGCATTGACTACAGGTTCTTATGACCGTGGGAGACTATTTAATACAGTTGACAAAAGCATACGATCGAGAATG
AGGCTTCTTGTCGCAACAAGGTCTTTAGCAAGAACAAGCATTTTGTTAACATGCTCTTCCACGAATTCATTTTC