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Detailed information on CNT30554810


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7M1L0|CB23C_PEA, E-value = 6e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440443Oryza glaberrimaAegilops tauschii52.7653.590.41344forward

Expression of CNT30554810

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MAWTKKPNMENMARRPFLISFTLSSANASGWRGCSARGSGSGCRGSRARPR*

>peptide 2 (32 aa)
QKWLYFGIEGVFVSDLIEMRNPLIRITPRIST*

Sequence

>CNT30554810
CAGAAATGGTTATATTTTGGGATCGAGGGAGTATTTGTTTCTGATCTAATAGAGATGAGAAATCCGCTAATCAGAATAACACCACGGATAAGTACCTAGA
CCATTAGTTGGGAAACAAATAAAATCATTATTGCAAAAACATCATCTTCTTCTTCATCTTCTTAGTGTACACAACACCAACTCGATCATCATCTCGTCGC
ACTAAACCCATCTTCCCCAACCCAAAGACAACGAACTCGCTGGCCACAAATCCATCCAACCACAATTAACCACTGCTAAGCTACGGTGCCCCACTTCACT
TGCCGGGGACGAAGTTGGTGGTCGGCGAGGTTCTCGAGGGGGCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGC
GGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAACGCCTCGGGATGGCGAGGATGCTCTGCGCGTGGATCAGGCTCGGGTTGCCGAGGTAGTCGAGC
CCGCCCTCGCTGAAGATCTGCGAGCCCGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTCCGGGCGAGGAGCTCCGGGAAGACGCAGCCGAGCG
CGCCCAGCATCGCCCACCGGGAGTGGATCACCTCCAGCTCCCGGTTCTTGGC