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Detailed information on CNT30551657


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30108554Oryza brachyanthaOryza longistaminata45.3216.4392.31247forward
CNT30103647Oryza brachyanthaOryza rufipogon45.3229.292.31247forward

Expression of CNT30551657

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MAISVPPVKAAAPMIPPRFQFSHLLFGDSFPRDCSSSFAAAIAEQATIISIASYNAKMFDYKTYIICVQDKTGRDHC

Sequence

>CNT30551657
AGTTAACCCAGCTCCAGCAGCTGATTAAGTTGCTGGTTAGTTAAGGATTATAATAAAATAGTTCTGGGTTCAGAAATAACAGCCTCAAGTAAGAAGGTAT
CACCAAACTATATATTCAAAGAACATCTAGACACACCTCCGAATGATGCAGCAACTGCCACAGAGCCTGCAGTATGTCCAGCAGCAGTAGCTATAGCAGC
AAACCCACTAGCTCCTATTAAAGGGACAAGTGTGTGCAGCGTTGGAGCCAGAGCAGTGAATCCTGCAGCAATTGCTGGAGCAGCCAAACCTAGACAGATC
ATACCCCCGGAGATGGCCATCAGTGTTCCTCCAGTCAAGGCGGCTGCGCCGATGATTCCACCACGCTTCCAATTCTCCCATCTGCTATTTGGTGACTCAT
TTCCACGTGACTGTTCTTCCTCTTTCGCTGCAGCCATAGCAGAGCAAGCAACCATTATCTCGATAGCTTCCTACAATGCCAAAATGTTCGATTACAAAAC
ATATATAATTTGTGTCCAAGACAAAACTGGTAGAGATCACTGTTC