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Detailed information on CNT30522694


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30557997Setaria italicaPanicum hallii25.4926.1786.82129forward

Expression of CNT30522694

Peptides detected in this lncRNA

>peptide 1 (40 aa)
GSTDSKKGEKQKRKKIPDDQTSTGKDQRVILAATPNYTNH*

Sequence

>CNT30522694
GGTAGTACAGACTCGAAAAAGGGGGAGAAACAAAAAAGGAAAAAGATACCGGACGACCAAACTAGTACAGGTAAAGACCAGCGCGTAATCCTGGCTGCCA
CACCAAATTATACCAATCACTAAGCCGCCGGGCGGCGACATGGCTTTGCTGCAGCAATTGCCAAAGCCTTCTTATCTTCTTCTGCATCTTCTTCTTCTTC
TAAGGAAGCAGCCAGTCACTCACTGATCAGACACACATCCACGAGCAGGAGCAGCAGCAGCAGCAGTGCTTGCGGGTAACATCAGCAGCAAGAGGTAGAT
GATAAGCACGGAGACGGACACTCTTCTTCTCTAAGCGGACGCCTTGTCGAACTTGAGGGGCTTCACCACCTCCCAGGTGAAGTCGGTGCCGTTCTTGCGG
ACCTCGGTGAGGCGCGCGCCGAGCTTGGTAGCGAGGACGTGGCTGAGCGGCATGAGCTCGGGGGTCTCGTCGGTGGCGTAGCCGAACATGTGGCCTTGGT
CGCCGG