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Detailed information on CNT30513661


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30111747Juglans regiaFicus carica23.1718.0983.09136forward

Expression of CNT30513661

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MFAPGFSTVGTDAFGGKVATGMEYAPPNVVLTRRNWCFRRRRCRWARRHRHRPLVLAP

>peptide 2 (46 aa)
MLLVARLLPGWNTLLQTLSLRAVTGVFGVAGVAGLAGIDTDLWYLLP

Sequence

>CNT30513661
TCTTGCTCCCTCCTCCTTATCCATTACACGTAGGACCATTTACCATTTATCTTCATTTGGATAATAAAATAAAATAAAATAAAAATCCAAGAAAAAAAAA
ACTAATAAACAAGCAATAAAAACACAATATATATAGATATATATAATTAATGATAAAAGTAGCTGATCTATCACCAGCGTTTGGGGCTGGCTGATCTGAC
TTAATTACAAAGTTCAGCTGGCAACAGTTACAGTACCACCGCTCCAAACCTCAGCGTTACCGATTACACACCTTTTCTAGTCAGCTCAGAAAGCAAGCTT
TCATAGCACACGCAAACATAGTACCAAAGATATTAACGACACTGGAACACCGGGAATAAAGAAGACAAAGCGCTATCTACATGCGACCTTAGGTAACCAG
TCACCTCAACGATGTTCGCTCCGGGTTTCTCCACTGTCGGCACCGATGCTTTTGGTGGCAAGGTTGCTACCGGGATGGAATACGCTCCTCCAAACGTTGT
CCTTACGCGCCGTAACTGGTGTTTTCGGCGTCGCCGGTGTCGCTGGGCTCGCCGGCATCGACACCGACCTCTGGTACTTGCTCCCCT